Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the user guide for the big picture.

5.2.4. sammba.data_fetchers.fetch_atlas_waxholm_rat_2014

sammba.data_fetchers.fetch_atlas_waxholm_rat_2014(data_dir=None, url=None, resume=True, verbose=1, downsample='117', symmetric_split=False)
Download and load Pape et al. rat atlas (dated 2014), downsampled

by the Scalable Brain Atlas.

Parameters

data_dir : str, optional

Path of the data directory. Use to forec data storage in a non- standard location. Default: None (meaning: default)

downsample : one of {‘78’, ‘117’, ‘200’}, optional

Downsampling resolution in microns.

url : string, optional

Download URL of the dataset. Overwrite the default URL.

resume : bool, optional

Whether to resumed download of a partly-downloaded file.

verbose : int, optional

Verbosity level (0 means no message).

Returns

data: sklearn.datasets.base.Bunch

dictionary-like object, contains:

  • ‘t2star’: str, path to nifti file containing the averaged T2* images.

  • ‘maps’: str, path to nifti file containing regions definition.

  • ‘labels’: structured numpy.array containing the names of the regions

    and their label values.

  • ‘description’: description about the atlas.