Note

This page is a reference documentation. It only explains the function signature, and not how to use it. Please refer to the user guide for the big picture.

5.5.1. sammba.graphs.create_pipeline_graph

sammba.graphs.create_pipeline_graph(pipeline_name, graph_file, graph_kind='hierarchical')

Creates pipeline graph for a given piepline.

Parameters

pipeline_name : one of {‘anat_to_common_rigid’, ‘anat_to_common_affine’,

‘anat_to_common_nonlinear’} Pipeline name.

graph_file : str.

Path to save the graph image to.

graph_kind : one of {‘orig’, ‘hierarchical’, ‘flat’, ‘exec’, ‘colored’}, optional.

The kind of the graph, passed to nipype.pipeline.workflows.Workflow().write_graph